MTB-GOA version 12

A further three missing papers, several newer papers, and lots of process annotations are in this new release, which is the next-to-last before this year's major update. I am using UniPathway to stay on top of pathways and I am more than half through it with process annotations. You can see it is a nice site which depends on electronic annotations, so it is only as good as those.

M.tb. sulfur metabolism at reactome

Not the whole sulfur, but assimilation and cysteine biosynthesis pathways are now at reactome, and a picture too. So, what's next? On the human side, I'll tackle MoCo biosynthesis. On the bacillus, maybe look at which processes have most functional annotations and start from there?

Wow, quality control quite involved me again with programming, and prototyping with ruby is really fast. What takes time at this moment of learning a new language is the unexpected language details (say quirks), and of course, OO design. So, most quality rules I know of are applied. I'm now waiting for marks from the EBI GOA group, and further rules to apply. This means, yes, both the Indians and the EBI got the data now, as planned. Meanwhile, stalled work on M.tb pathways in reactome format continues.